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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11358880_11359276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11358880 - 11359276

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

GTTCCTTTCATC

Flanking Amino Acid:

WRKARRCQREEVSKTPSASS

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.9

30.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.77

0.8

75.9

Minor 5ss

33.9

-1.8

2.8

41.5

45.1

Minor BPS

57.2

0.21

1.7

68.24

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011508

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011972

11358550 - 11361882

3333