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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11378109_11380251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11378109 - 11380251

Intron Length:

2143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

CCCTGTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATGGAT

U12 Branch Point Sequence:

ATGAGTCAAACC

Flanking Amino Acid:

SSDTQTGSDGRHSSEPNHSP

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

64.6

40.3

Major BPS

54.8

0.12

1.4

55.1

42.1

Major PPT

0.36

0.8

57.5

33.4

Minor 5ss

35.2

-1.7

3.3

49.2

41.2

Minor BPS

39.6

-0.8

2.1

49.63

Associated Gene:

Gene:

PRAG1

Ensembl Gene ID:

ENSAPLG00000011900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012381

11373930 - 11389077

15148