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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11380410_11387395_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11380410 - 11387395

Intron Length:

6986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCAGC

5'SS Class:

major

3'SS Sequence:

TCGTTGTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GCCTCCTGACCC

Flanking Amino Acid:

PPPPPPKKQSRRALKMNPNN

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

61.6

43.1

Major BPS

68.9

0.47

59.2

39.1

Major PPT

73.8

0.54

0.9

65.9

40.9

Minor 5ss

45.9

-0.4

2.6

61.2

43.2

Minor BPS

51.3

0.02

1.8

59.68

45.2

Associated Gene:

Gene:

PRAG1

Ensembl Gene ID:

ENSAPLG00000011900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012381

11373930 - 11389077

15148