Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_11465148_11466283_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11465148 - 11466283

Intron Length:

1136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTCCG

5'SS Class:

major

3'SS Sequence:

TTGATATGTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTCTTTTGATA

Flanking Amino Acid:

TKYSYCMLTDGSWDMSKFLN

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

58.9

45.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

61.2

0.25

1.2

64.8

Minor 5ss

40.2

-1.1

2.7

42.6

44.1

Minor BPS

66.8

0.52

1.1

74.7

Associated Gene:

Gene:

ERI1

Ensembl Gene ID:

ENSAPLG00000012159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012669

11463645 - 11471044

7400

ENSAPLT00000028423

11463167 - 11471320

8154