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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11498172_11509958_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11498172 - 11509958

Intron Length:

11787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTAAGAT

U12 Branch Point Sequence:

TTTCCCTGCACA

Flanking Amino Acid:

AIKGKIDVCIVLLQHGADPN

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

27.7

Major BPS

49.8

-0

1.3

49.1

44.8

Major PPT

76.7

0.6

0.9

72.1

32.6

Minor 5ss

40.4

-1.1

2.8

51.7

39.2

Minor BPS

61.1

0.34

1.9

78.11

38.1

Associated Gene:

Gene:

TNKS

Ensembl Gene ID:

ENSAPLG00000002335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002497

11493182 - 11588661

95480

ENSAPLT00000028559

11493130 - 11588713

95584