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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11568957_11570013_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
11568957 - 11570013

Intron Length:
1057

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCG|GTAGGTAAA

5'SS Class:
major

3'SS Sequence:
TTTCTGTATGTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAATTAT

U12 Branch Point Sequence:
TATAACTTAATA

Flanking Amino Acid:
GNEAVQQILSESTPVRTSDV

Intron Amino Acid Position:
457

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.7
0.68
1
74.5
37.6

Major BPS
76.9
0.67
1
66.3
40.4

Major PPT
77.7
0.62
0.9
73.9
35.8

Minor 5ss
34.1
-1.8
3
42.1
44.8

Minor BPS
67.6
0.55
1.5
74.8
36.1

Associated Gene:

Gene:
TNKS

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11493130 - 11588713
95584

11493182 - 11588661
95480