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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11585657_11586498_F


Intron Information:

Intron Rank:
25

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
11585657 - 11586498

Intron Length:
842

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAATGAAG

5'SS Class:
major

3'SS Sequence:
TTGTGTATTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTAACAA

U12 Branch Point Sequence:
TTTTGTGTATTC

Flanking Amino Acid:
NHHNERMLFHGSPFINAIIH

Intron Amino Acid Position:
1001

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.9
0.52
1.1
64.2
41.4

Major BPS
61.8
0.29
1.1
69.7
35.6

Major PPT
75
0.56
0.9
67
43.8

Minor 5ss
31.8
-2.1
3.1
36.5
41.8

Minor BPS
44.8
-0.4
2.5
65.17
41.7

Associated Gene:

Gene:
TNKS

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11493182 - 11588661
95480

11493130 - 11588713
95584