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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11710461_11710839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11710461 - 11710839

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAACTAT

U12 Branch Point Sequence:

GCTGAGCAAACT

Flanking Amino Acid:

KALLAMYTNQADQCRKLSAS

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

48.2

-0.1

1.2

44.9

37.7

Major PPT

75.1

0.56

0.7

72.5

25.7

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

35.6

-1

2.5

53.85

47.1

Associated Gene:

Gene:

SRP72

Ensembl Gene ID:

ENSAPLG00000008751

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009181

11704951 - 11717094

12144