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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11721784_11721884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11721784 - 11721884

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGCCT

5'SS Class:

major

3'SS Sequence:

CTTCTCGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CTGTGCTGACCG

Flanking Amino Acid:

AGPARGWAQPDRVLLREVQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

63.1

Major BPS

66.3

0.4

1.1

41.8

Major PPT

81.3

0.7

0.8

72.7

37.5

Minor 5ss

27.5

-2.6

3.2

31.7

42.2

Minor BPS

44.6

-0.5

2.2

51.53

48.6

Associated Gene:

Gene:

SARAF

Ensembl Gene ID:

ENSAPLG00000009337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038113

11721699 - 11726551

4853

ENSAPLT00000009727

11721699 - 11727046

5348