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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11722061_11723205_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11722061 - 11723205

Intron Length:

1145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TATTTTGTATTG

Flanking Amino Acid:

NKGWDGYDVQWQCKADLENT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

91.4

0.93

0.6

84.4

30.5

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

45.3

-0.4

2.2

55.16

41.2

Associated Gene:

Gene:

SARAF

Ensembl Gene ID:

ENSAPLG00000009337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038113

11721699 - 11726551

4853

ENSAPLT00000009727

11721699 - 11727046

5348