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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11725528_11726406_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11725528 - 11726406

Intron Length:

879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TACTAATGAAGT

Flanking Amino Acid:

GLLGYLAGSHRAQPRSHFSM

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.1

28.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

84.8

0.78

0.8

83.9

31.1

Minor 5ss

-1.2

3.2

55.7

48.5

Minor BPS

44.9

-0.3

2.1

64.53

Associated Gene:

Gene:

SARAF

Ensembl Gene ID:

ENSAPLG00000009337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038113

11721699 - 11726551

4853

ENSAPLT00000009727

11721699 - 11727046

5348