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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11726523_11727020_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11726523 - 11727020

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

TGTAACGGAGCT

Flanking Amino Acid:

GSSTGTRTASGFGGTKRR*

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

65.7

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

92.1

0.95

0.6

88.1

21.8

Minor 5ss

31.2

-2.2

3.3

38.7

40.9

Minor BPS

40.8

-0.6

2.3

63.98

45.3

Associated Gene:

Gene:

SARAF

Ensembl Gene ID:

ENSAPLG00000009337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009727

11721699 - 11727046

5348