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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11764337_11765200_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11764337 - 11765200

Intron Length:

864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

GGGTCCAGATGT

Flanking Amino Acid:

VDRATVSPWPGTTLNLLKFP

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

0.67

1.1

77.7

37.1

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

40.5

-0.6

2.1

55.6

45.7

Associated Gene:

Gene:

NOA1

Ensembl Gene ID:

ENSAPLG00000026782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021098

11759585 - 11766338

6754