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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11766356_11766511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11766356 - 11766511

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

GTGCTCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

TGCTCCCCACAG

Flanking Amino Acid:

MYDADEDMQYDEDDDE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.6

36.5

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

68.9

0.43

0.9

61.6

Minor 5ss

25.3

-2.8

3.1

30.1

43.1

Minor BPS

40.5

-0.8

2.1

46.57

45.5

Associated Gene:

Gene:

POLR2B

Ensembl Gene ID:

ENSAPLG00000009560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010035

11766337 - 11780121

13785