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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11766356_11767361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11766356 - 11767361

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTTAATTAATG

Flanking Amino Acid:

PSRRHVRRRRSSYFDEKGLV

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.6

36.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

25.3

-2.8

3.1

30.1

43.1

Minor BPS

59.4

0.16

1.8

68.34

38.9

Associated Gene:

Gene:

POLR2B

Ensembl Gene ID:

ENSAPLG00000009560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024641

11765067 - 11780970

15904

ENSAPLT00000024418

11765067 - 11780121

15055