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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11766585_11767361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11766585 - 11767361

Intron Length:

777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGACTGGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

ATTTAATTAATG

Flanking Amino Acid:

LWQEACWIVISSYFDEKGLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

63.1

43.4

Major BPS

90.7

1.01

0.7

19.9

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

32.2

-2

3.1

40.6

45.6

Minor BPS

59.4

0.16

1.8

68.34

38.9

Associated Gene:

Gene:

POLR2B

Ensembl Gene ID:

ENSAPLG00000009560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010035

11766337 - 11780121

13785

ENSAPLT00000037160

11758022 - 11780970

22949