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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11773262_11773391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11773262 - 11773391

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAATTT

5'SS Class:

major

3'SS Sequence:

ATGCTACATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

ATTTCACTAACT

Flanking Amino Acid:

AHQARAGVSQVLNRLTFAST

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

75.1

35.7

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

66.1

0.36

56.2

43.4

Minor 5ss

42.2

-0.9

3.5

64.9

46.4

Minor BPS

66.6

0.6

1.9

89.02

34.7

Associated Gene:

Gene:

POLR2B

Ensembl Gene ID:

ENSAPLG00000009560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024641

11765067 - 11780970

15904

ENSAPLT00000024418

11765067 - 11780121

15055

ENSAPLT00000010035

11766337 - 11780121

13785

ENSAPLT00000037160

11758022 - 11780970

22949