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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11774142_11774481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11774142 - 11774481

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATAACCG

5'SS Class:

major

3'SS Sequence:

CTTTCTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

GGTTTTTTACTC

Flanking Amino Acid:

RRQMDIIVSEVSMIRDIRER

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

42.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

0.76

0.8

80.2

31.8

Minor 5ss

37.7

-1.4

3.1

48.6

47.1

Minor BPS

55.2

0.14

1.6

62.8

37.3

Associated Gene:

Gene:

POLR2B

Ensembl Gene ID:

ENSAPLG00000009560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010035

11766337 - 11780121

13785

ENSAPLT00000037160

11758022 - 11780970

22949

ENSAPLT00000024641

11765067 - 11780970

15904

ENSAPLT00000024418

11765067 - 11780121

15055