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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11774637_11774894_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11774637 - 11774894

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAT

5'SS Class:

strong_major

3'SS Sequence:

ATTGATTATTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

AGTATTTCAAAC

Flanking Amino Acid:

QLKEREYNNYSWQDLVASGV

Intron Amino Acid Position:

652

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

76.8

33.7

Major BPS

0.79

0.8

83.7

25.7

Major PPT

0.54

70.7

43.8

Minor 5ss

28.2

-2.5

3.1

38.3

46.6

Minor BPS

47.4

-0.2

1.6

55.7

35.9

Associated Gene:

Gene:

POLR2B

Ensembl Gene ID:

ENSAPLG00000009560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037160

11758022 - 11780970

22949

ENSAPLT00000024641

11765067 - 11780970

15904

ENSAPLT00000024418

11765067 - 11780121

15055

ENSAPLT00000010035

11766337 - 11780121

13785