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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11775094_11775189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11775094 - 11775189

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

ATGTGCATAATA

Flanking Amino Acid:

SIIPFPDHNQSPRNTYQSAM

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

70.8

0.52

70.6

31.6

Major PPT

75.8

0.58

0.9

69.3

36.9

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

51.5

0.04

66.5

40.3

Associated Gene:

Gene:

POLR2B

Ensembl Gene ID:

ENSAPLG00000009560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010035

11766337 - 11780121

13785

ENSAPLT00000037160

11758022 - 11780970

22949

ENSAPLT00000024641

11765067 - 11780970

15904

ENSAPLT00000024418

11765067 - 11780121

15055