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Intron Name: Anas_platyrhynchos_platyrhynchos_4_11777190_11777422_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11777190 - 11777422

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAC

U12 Branch Point Sequence:

TTTTCCTTCCCC

Flanking Amino Acid:

FEKPTRETCQGMRHAIYDKL

Intron Amino Acid Position:

839

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

62.6

0.31

1.2

55.1

41.7

Major PPT

0.29

60.2

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

48.6

-0.1

3.6

82.21

38.6

Associated Gene:

Gene:

POLR2B

Ensembl Gene ID:

ENSAPLG00000009560

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024641

11765067 - 11780970

15904

ENSAPLT00000024418

11765067 - 11780121

15055

ENSAPLT00000010035

11766337 - 11780121

13785

ENSAPLT00000037160

11758022 - 11780970

22949