Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_11784807_11796320_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11784807 - 11796320

Intron Length:

11514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TGCCTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

GTGCTGAGAAGT

Flanking Amino Acid:

AQRSKGACEQGPSIVTPPKD

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

0.72

0.8

76.3

32.3

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

35.5

-1

2.3

51.52

42.5

Associated Gene:

Gene:

IGFBP7

Ensembl Gene ID:

ENSAPLG00000024839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036687

11781115 - 11796789

15675