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Intron Name: Anas_platyrhynchos_platyrhynchos_4_12257400_12260535_F

Intron Information:

Intron Rank:

127437

Intron Class:

major

Intron Phase:

Intron Coordinates:

12257400 - 12260535

Intron Length:

3136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCATA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTATACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTCTTTAAGG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

79.7

35.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.3

0.79

0.9

80.9

35.5

Minor 5ss

-0.1

2.5

65.8

45.4

Minor BPS

74.5

0.63

1.6

78.9

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018719

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029630

12255630 - 12260672

5043