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Intron Name: Anas_platyrhynchos_platyrhynchos_4_12278143_12291512_F

Intron Information:

Intron Rank:

144992

Intron Class:

major

Intron Phase:

Intron Coordinates:

12278143 - 12291512

Intron Length:

13370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCATTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTCTGTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

67.8

0.4

1.1

67.3

37.3

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

53.6

0.19

2.4

82.98

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028178

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041835

12277467 - 12292624

15158