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Intron Name: Anas_platyrhynchos_platyrhynchos_4_12632140_12647729_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
12632140 - 12647729

Intron Length:
15590

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTACTGGAC

5'SS Class:
major

3'SS Sequence:
TCCTCTCCAACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGAAAT

U12 Branch Point Sequence:
TTTGTTTGAAAT

Flanking Amino Acid:
GTSRSPKSSDVFLCPGLLKG

Intron Amino Acid Position:
16

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
60.3
0.24
1.2
51.7
39.6

Major BPS
67.2
0.43
1.2
73.3
39.1

Major PPT
74
0.54
0.8
69.5
29.8

Minor 5ss
29
-2.4
3.7
40.7
45.9

Minor BPS
57.2
0.3
1.6
77.37
39.2

Associated Gene:

Gene:
ADGRL3

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12632070 - 12814160
182091