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Intron Name: Anas_platyrhynchos_platyrhynchos_4_12860744_12865873_F

Intron Information:

Intron Rank:

124152

Intron Class:

major

Intron Phase:

Intron Coordinates:

12860744 - 12865873

Intron Length:

5130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCTGA

5'SS Class:

major

3'SS Sequence:

TTCCAACCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATTAT

U12 Branch Point Sequence:

ATTATTCCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

67.8

40.1

Major BPS

60.8

0.27

1.2

51.8

43.6

Major PPT

69.3

0.44

0.9

61.8

33.5

Minor 5ss

43.3

-0.7

2.9

56.8

47.3

Minor BPS

47.3

-0.2

1.8

62.25

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020602

12859403 - 12868025

8623

ENSAPLT00000029777

12859403 - 12867120

7718