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Intron Name: Anas_platyrhynchos_platyrhynchos_4_12870113_12882739_F

Intron Information:

Intron Rank:

124160

Intron Class:

major

Intron Phase:

Intron Coordinates:

12870113 - 12882739

Intron Length:

12627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAAAA

U12 Branch Point Sequence:

GTTTCAGTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

59.3

0.23

65.3

28.1

Major PPT

80.4

0.68

0.9

77.2

37.1

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

46.9

-0.1

2.4

73.8

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047906

12870088 - 12886173

16086