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Intron Name: Anas_platyrhynchos_platyrhynchos_4_12906173_12907348_F

Intron Information:

Intron Rank:

145065

Intron Class:

major

Intron Phase:

Intron Coordinates:

12906173 - 12907348

Intron Length:

1176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGCGC

5'SS Class:

strong_major

3'SS Sequence:

ACCCACATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

ACTGGTTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

67.8

43.5

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

66.7

0.38

0.9

57.8

36.3

Minor 5ss

31.1

-2.2

3.3

41.9

44.9

Minor BPS

54.4

0.12

1.9

63.77

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041723

12905865 - 12913914

8050