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Intron Name: Anas_platyrhynchos_platyrhynchos_4_12907464_12908116_F

Intron Information:

Intron Rank:

145066

Intron Class:

major

Intron Phase:

Intron Coordinates:

12907464 - 12908116

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TATGAAACAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

1.2

78.8

38.3

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

83.6

0.76

0.8

81.1

30.9

Minor 5ss

39.2

-1.2

2.8

49.7

46.6

Minor BPS

40.4

-0.6

2.1

61.05

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041723

12905865 - 12913914

8050