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Intron Name: Anas_platyrhynchos_platyrhynchos_4_12908274_12911997_F

Intron Information:

Intron Rank:

145067

Intron Class:

major

Intron Phase:

Intron Coordinates:

12908274 - 12911997

Intron Length:

3724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTCC

5'SS Class:

strong_major

3'SS Sequence:

CTGCCGTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTACAT

U12 Branch Point Sequence:

CTGCCGTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

30.3

Major BPS

52.4

0.06

1.3

62.9

43.3

Major PPT

66.9

0.38

61.1

Minor 5ss

40.8

-1

2.8

53.7

43.5

Minor BPS

56.9

0.21

2.1

68.47

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041723

12905865 - 12913914

8050