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Intron Name: Anas_platyrhynchos_platyrhynchos_4_1323676_1340758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1323676 - 1340758

Intron Length:

17083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGGAG

5'SS Class:

major

3'SS Sequence:

TTTTTTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTTCTGTTGATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

60.4

40.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

93.1

0.97

0.7

92.3

26.6

Minor 5ss

23.6

-3

3.3

43.5

Minor BPS

49.3

-0.2

2.1

63.08

39.5

Associated Gene:

Gene:

UGT8

Ensembl Gene ID:

ENSAPLG00000008294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008618

1323598 - 1363942

40345