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Intron Name: Anas_platyrhynchos_platyrhynchos_4_13259197_13260343_F

Intron Information:

Intron Rank:

138118

Intron Class:

major

Intron Phase:

Intron Coordinates:

13259197 - 13260343

Intron Length:

1147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTACAATAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

76.2

32.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

37.9

-1.4

2.7

45.5

37.1

Minor BPS

60.6

0.33

1.9

79.02

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036671

13258883 - 13274168

15286

ENSAPLT00000034341

13259118 - 13260694

1577