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Intron Name: Anas_platyrhynchos_platyrhynchos_4_13260478_13260542_F

Intron Information:

Intron Rank:

138119

Intron Class:

major

Intron Phase:

Intron Coordinates:

13260478 - 13260542

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

ATGGTCTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

77.1

0.67

77.9

32.2

Major PPT

78.3

0.64

0.8

73.3

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

69.2

0.58

1.4

71.97

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034341

13259118 - 13260694

1577