Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_13538007_13538409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13538007 - 13538409

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTGAC

5'SS Class:

strong_major

3'SS Sequence:

ACCTTTGCGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

ATGCCTTTACCT

Flanking Amino Acid:

LVSCPNYTYEVGSWISFTVM

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

33.9

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

65.3

0.34

1.1

60.7

39.8

Minor 5ss

31.9

-2.1

3.3

44.6

Minor BPS

61.1

0.43

1.6

75.52

41.4

Associated Gene:

Gene:

TECRL

Ensembl Gene ID:

ENSAPLG00000004528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033094

13537300 - 13593990

56691

ENSAPLT00000004666

13536252 - 13593990

57739

ENSAPLT00000034331

13534727 - 13593990

59264