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Intron Name: Anas_platyrhynchos_platyrhynchos_4_13652106_13657912_F

Intron Information:

Intron Rank:

133416

Intron Class:

major

Intron Phase:

Intron Coordinates:

13652106 - 13657912

Intron Length:

5807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

ATTGTTTCCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

0.63

0.9

70.2

41.3

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

45.1

-0.3

1.9

65.22

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045797

13651848 - 13658239

6392

ENSAPLT00000021245

13628016 - 13658239

30224