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Intron Name: Anas_platyrhynchos_platyrhynchos_4_13667925_13668468_F

Intron Information:

Intron Rank:

127217

Intron Class:

major

Intron Phase:

Intron Coordinates:

13667925 - 13668468

Intron Length:

544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACAAAT

U12 Branch Point Sequence:

GTGTGCCTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

80.1

30.7

Major BPS

51.7

0.04

1.2

59.2

35.9

Major PPT

0.88

0.6

81.6

30.5

Minor 5ss

34.1

-1.8

2.8

39.6

46.4

Minor BPS

44.8

-0.3

2.2

65.11

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035762

13658260 - 13669536

11277