About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_13704093_13707788_R

Intron Information:

Intron Rank:
6
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
13704093 - 13707788
Intron Length:
3696

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GTG|GTATGTATA
5'SS Class:
strong_major
3'SS Sequence:
ATTTGTTTTGTAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
AAATGAT
U12 Branch Point Sequence:
AAAATAAGAACA
Flanking Amino Acid:
EMVDKKEFLVLQEIFRKKNE
Intron Amino Acid Position:
169

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83
0.78
0.9
81.5
31.6
Major BPS
68
0.45
1
57.8
39
Major PPT
82.5
0.73
0.8
77.7
36
Minor 5ss
45.5
-0.5
2.5
56.3
43.3
Minor BPS
40.8
-0.7
1.8
48.3
34

Associated Gene:

Gene:
MICU3
Ensembl Gene ID:
ENSAPLG00000012995
Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000013561
13689254 - 13722413
33160