Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_13735695_13737614_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13735695 - 13737614

Intron Length:

1920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGAGCC

5'SS Class:

major

3'SS Sequence:

CTTTGGATATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTCCTTTGGATA

Flanking Amino Acid:

RGTRQDHSLFGILEFISVAV

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.1

60.1

40.3

Major BPS

79.1

0.72

69.3

38.4

Major PPT

69.7

0.44

67.2

42.6

Minor 5ss

30.8

-2.2

3.6

44.2

Minor BPS

48.7

-0.1

1.4

59.21

34.6

Associated Gene:

Gene:

FGF20

Ensembl Gene ID:

ENSAPLG00000017099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021315

13734088 - 13739701

5614