Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_13745464_13750242_F

Intron Information:

Intron Rank:

150262

Intron Class:

major

Intron Phase:

Intron Coordinates:

13745464 - 13750242

Intron Length:

4779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTAT

5'SS Class:

major

3'SS Sequence:

GGGACTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTTTCTGGGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.1

32.4

Major BPS

78.6

0.71

79.6

32.9

Major PPT

62.5

0.28

1.1

53.8

45.7

Minor 5ss

44.1

-0.6

2.9

63.8

41.6

Minor BPS

55.3

0.25

2.2

83.62

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018775

13745251 - 13755426

10176