Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_13818871_13822662_F

Intron Information:

Intron Rank:

132179

Intron Class:

major

Intron Phase:

Intron Coordinates:

13818871 - 13822662

Intron Length:

3792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCAAATTTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TCACCCTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

83.2

30.8

Major BPS

71.2

0.53

70.3

31.9

Major PPT

75.6

0.58

68.4

41.6

Minor 5ss

36.4

-1.5

2.7

41.6

38.3

Minor BPS

59.1

0.37

1.6

73.15

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028486

13817918 - 13823405

5488

ENSAPLT00000030728

13818771 - 13879535

60765