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Intron Name: Anas_platyrhynchos_platyrhynchos_4_13823168_13825179_F

Intron Information:

Intron Rank:

132189

Intron Class:

major

Intron Phase:

Intron Coordinates:

13823168 - 13825179

Intron Length:

2012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TATTGTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATATTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

100

1.24

0.5

100

Major PPT

0.72

0.8

76.8

37.1

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

54.1

-0

1.9

67.66

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040848

13810311 - 13825695

15385