Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_14024733_14025526_F

Intron Information:

Intron Rank:

146025

Intron Class:

major

Intron Phase:

Intron Coordinates:

14024733 - 14025526

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTACC

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTTTCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

AATGTCAAAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

1.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

79.3

0.66

0.9

77.2

36.4

Minor 5ss

33.4

-1.9

2.4

38.7

Minor BPS

-0.6

1.9

47.04

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028681

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033796

14024096 - 14025988

1893