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Intron Name: Anas_platyrhynchos_platyrhynchos_4_1419278_1419840_R

Intron Information:

Intron Rank:

131889

Intron Class:

major

Intron Phase:

Intron Coordinates:

1419278 - 1419840

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGCAAA

5'SS Class:

major

3'SS Sequence:

TTTTTGCTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTTCTATTACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

66.8

40.3

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

0.79

0.8

77.9

36.6

Minor 5ss

37.4

-1.4

3.1

44.4

45.6

Minor BPS

49.7

0.05

75.71

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018172

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029329

1419221 - 1421039

1819