Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_1463519_1465283_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1463519 - 1465283

Intron Length:

1765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACACTAC

5'SS Class:

major

3'SS Sequence:

GTTTTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

AATATCACAATG

Flanking Amino Acid:

RRGFIHNGIMVLPRQTCGLF

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.1

55.5

38.6

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

87.1

0.84

0.8

84.6

Minor 5ss

42.6

-0.8

3.2

55.2

44.7

Minor BPS

44.5

-0.5

1.8

49.01

38.3

Associated Gene:

Gene:

NDST4

Ensembl Gene ID:

ENSAPLG00000008309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008669

1426237 - 1527439

101203