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Intron Name: Anas_platyrhynchos_platyrhynchos_4_1475168_1480222_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1475168 - 1480222

Intron Length:

5055

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TCTGCTGTTACT

Flanking Amino Acid:

LGFSGKFYHTGTEEEDAGDD

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

73.8

0.59

1.3

72.8

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

47.2

-0.1

2.4

71.11

46.2

Associated Gene:

Gene:

NDST4

Ensembl Gene ID:

ENSAPLG00000008309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008669

1426237 - 1527439

101203