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Intron Name: Anas_platyrhynchos_platyrhynchos_4_14829829_14842033_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14829829 - 14842033

Intron Length:

12205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

ATTTACTTATTC

Flanking Amino Acid:

ELHLQSTEGEIFLNADTIRL

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.7

33.5

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

85.4

0.8

0.6

81.4

23.6

Minor 5ss

44.1

-0.6

2.8

56.9

47.3

Minor BPS

0.36

1.8

73.87

36.9

Associated Gene:

Gene:

SGCZ

Ensembl Gene ID:

ENSAPLG00000013589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014148

14672302 - 14843118

170817