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Intron Name: Anas_platyrhynchos_platyrhynchos_4_14908668_14910306_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14908668 - 14910306

Intron Length:

1639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

GGTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

TTTCCCTTTTTT

Flanking Amino Acid:

VLIRFFILKKEDPVPNGLRA

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

80.2

0.68

0.9

73.8

36.9

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

45.4

-0.2

3.6

81.55

40.1

Associated Gene:

Gene:

SLC20A2

Ensembl Gene ID:

ENSAPLG00000013621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033376

14883324 - 14916463

33140

ENSAPLT00000045431

14883324 - 14922152

38829

ENSAPLT00000029143

14883324 - 14922152

38829

ENSAPLT00000038790

14889926 - 14922152

32227

ENSAPLT00000014229

14897442 - 14916463

19022

ENSAPLT00000034498

14889670 - 14922152

32483

ENSAPLT00000034266

14889670 - 14922599

32930