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Intron Name: Anas_platyrhynchos_platyrhynchos_4_14942964_14943059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14942964 - 14943059

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

CCTTGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGTGAC

U12 Branch Point Sequence:

CCACGCGTGACC

Flanking Amino Acid:

ASLALLVYARRNKRRILRIF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

55.1

43.9

Major BPS

46.4

-0.2

1.4

36.7

42.3

Major PPT

72.2

0.5

0.8

65.4

30.4

Minor 5ss

23.7

-3

3.3

29.1

43.5

Minor BPS

-0.7

2.3

47.34

42.6

Associated Gene:

Gene:

SMIM19

Ensembl Gene ID:

ENSAPLG00000000735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017506

14941722 - 14944601

2880

ENSAPLT00000000708

14941722 - 14945699

3978

ENSAPLT00000030168

14941722 - 14943438

1717

ENSAPLT00000024126

14941722 - 14945389

3668