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Intron Name: Anas_platyrhynchos_platyrhynchos_4_14943164_14943405_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14943164 - 14943405

Intron Length:

242

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCTATGAGA

5'SS Class:

weak_major

3'SS Sequence:

GGCGCTGGGCGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

GGCGCCTCAGCG

Flanking Amino Acid:

EKCYGTLATQSGAIDYSVHE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.3

0.1

1.4

55.4

41.9

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

-0.5

1.7

30.2

41.5

Minor 5ss

19.4

-3.5

3.5

23.8

29.5

Minor BPS

44.4

-0.5

1.9

45.22

46.5

Associated Gene:

Gene:

SMIM19

Ensembl Gene ID:

ENSAPLG00000000735

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030168

14941722 - 14943438

1717