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Intron Name: Anas_platyrhynchos_platyrhynchos_4_14958398_14959085_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14958398 - 14959085

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TCGTCTCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TGCCAGTTAATG

Flanking Amino Acid:

TRAGADSGTLEMSCPALQDI

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.2

35.9

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

75.1

0.57

0.9

69.9

35.6

Minor 5ss

29.2

-2.4

2.8

32.4

36.1

Minor BPS

44.9

-0.5

2.2

50.41

43.7

Associated Gene:

Gene:

HGSNAT

Ensembl Gene ID:

ENSAPLG00000014020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014609

14951579 - 14962004

10426